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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
19426

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LRIT3 HGNC:24783 (HGNC)
345193 (Entrez Gene)
615004 (OMIM)
Chr4 q25 Chr4:109848184-109872315 (+)
GRCh38
Night Blindness, Congenital Stationary, Type 1F; CSNB1F
Q3SXY7 (UniProt | EBI)
NM_198506 (RefSeq)
mouse Lrit3 MGI:2685267 (MGI)
242235 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 58.99 cM Chr3:129787881-129804030 (-)
GRCm38
OTTMUSG00000045099 (VEGA)
OTTMUSP00000066145 (VEGA)
OTTMUST00000118505 (VEGA)
rat Lrit3 502596 (Entrez Gene)
Chr2 q43 XP_006224315 (RefSeq)
chimpanzee LRIT3 737084 (Entrez Gene)
Chr4 XP_001139031 (RefSeq)
rhesus macaque LRIT3 698360 (Entrez Gene)
Chr5 XP_001088511 (RefSeq)
cattle LRIT3 511618 (Entrez Gene)
Chr6 NP_001178443 (RefSeq)
NM_001191514 (RefSeq)
dog LRIT3 610534 (Entrez Gene)
Chr32 XP_853150 (RefSeq)
chicken LRIT3 422696 (Entrez Gene)
Chr4 XP_420649 (RefSeq)
western clawed frog lrit3 100494489 (Entrez Gene)
ChrUN XP_002934296 (RefSeq)
zebrafish lrit3a 558559 (Entrez Gene)
Chr14 NP_001122166 (RefSeq)
NM_001128694 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory