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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1913

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human OPHN1 HGNC:8148 (HGNC)
4983 (Entrez Gene)
300127 (OMIM)
OPHN1 (MyGene.info)
HGNC homology
ChrX q12 ChrX:68042344-68433841 (-)
GRCh38.p7
X-linked mental retardation with cerebellar hypoplasia and distinctive facial appearance
O60890 (UniProt | EBI)
NM_002547 (RefSeq)
mouse Ophn1 MGI:2151070 (MGI)
94190 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
ChrX 42.94 cM ChrX:98554277-98891025 (-)
GRCm38
syndromic intellectual disability
ENSMUSG00000031214 (Ensembl Gene Model)
ENSMUSP00000033560 (Ensembl)
ENSMUST00000033560 (Ensembl)
rat Ophn1 312108 (Entrez Gene)
ChrX q22 P0CAX5 (UniProt | EBI)
NM_001107848 (RefSeq)
chimpanzee OPHN1 449628 (Entrez Gene)
ChrX Q7YQL6 (UniProt | EBI)
NM_001009021 (RefSeq)
cattle OPHN1 525644 (Entrez Gene)
ChrX XP_024844560 (RefSeq)
dog OPHN1 607363 (Entrez Gene)
ChrX XP_022272070 (RefSeq)
chicken OPHN1 422162 (Entrez Gene)
Chr4 XP_015133812 (RefSeq)
frog, western clawed ophn1 779935 (Entrez Gene)
Chr8 NP_001072480 (RefSeq)
NM_001079012 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
03/31/2020
MGI 6.15
The Jackson Laboratory