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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
19080

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human NLRP1 HGNC:14374 (HGNC)
22861 (Entrez Gene)
606636 (OMIM)
HGNC homology
Chr17 p13.2 Chr17:5501399-5584512 (-)
GRCh38.p2
Corneal Intraepithelial Dyskeratosis and Ectodermal Dysplasia; CIDED
Vitiligo-Associated Multiple Autoimmune Disease Susceptibility 1;
Q9C000 (UniProt | EBI)
NM_001033053 (RefSeq)
mouse Nlrp1b MGI:3582959 (MGI)
637515 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 43.23 cM Chr11:71153102-71230733 (-)
GRCm38
OTTMUSG00000006087 (VEGA)
OTTMUSP00000045499 (VEGA)
OTTMUST00000084418 (VEGA)
rat Nlrp1b 691998 (Entrez Gene)
Chr10 q24 XP_008766147 (RefSeq)
chimpanzee NLRP1 468451 (Entrez Gene)
Chr17 XP_009429967 (RefSeq)
rhesus macaque NLRP1 721648 (Entrez Gene)
Chr16 NP_001107821 (RefSeq)
NM_001114349 (RefSeq)
cattle NLRP1 528166 (Entrez Gene)
Chr19 XP_010822338 (RefSeq)
dog NLRP1 489449 (Entrez Gene)
Chr5 XP_005619937 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory