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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1905

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human OCLN HGNC:8104 (HGNC)
100506658 (Entrez Gene)
602876 (OMIM)
Chr Chr5:69492292-69558104 (+)
GRCh38
Band-Like Calcification with Simplified Gyration and Polymicrogyria;
Q16625 (UniProt | EBI)
NM_002538 (RefSeq)
mouse Ocln MGI:106183 (MGI)
18260 (Entrez Gene)
Gene Tree
VISTA-Point
Chr13 53.23 cM Chr13:100496507-100552718 (-)
GRCm38
OTTMUSG00000035055 (VEGA)
OTTMUSP00000048684 (VEGA)
OTTMUST00000089160 (VEGA)
rat Ocln 83497 (Entrez Gene)
Chr2 q12 Q6P6T5 (UniProt | EBI)
NM_031329 (RefSeq)
chimpanzee OCLN 741925 (Entrez Gene)
Chr5 XP_001158243 (RefSeq)
rhesus macaque OCLN 700504 (Entrez Gene)
Chr6 XP_001094544 (RefSeq)
cattle OCLN 512405 (Entrez Gene)
Chr20 NP_001075902 (RefSeq)
NM_001082433 (RefSeq)
dog OCLN 403844 (Entrez Gene)
Chr2 Q28269 (UniProt | EBI)
NM_001003195 (RefSeq)
western clawed frog ocln 548702 (Entrez Gene)
ChrUN NP_001015948 (RefSeq)
NM_001015948 (RefSeq)
zebrafish oclna 405757 (Entrez Gene)
Chr10 NP_997997 (RefSeq)
NM_212832 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory