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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
19023

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COLCA2 HGNC:26978 (HGNC)
120376 (Entrez Gene)
615694 (OMIM)
HGNC homology
Chr11 q23.1 Chr11:111298517-111308735 (+)
GRCh38.p7
A8K830 (UniProt | EBI)
NM_001271457 (RefSeq)
mouse Colca2 MGI:2685530 (MGI)
100502940 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr9 28.02 cM Chr9:51270258-51278569 (-)
GRCm38
ENSMUSG00000079559 (Ensembl Gene Model)
ENSMUSP00000150539 (Ensembl)
ENSMUST00000215038 (Ensembl)
rat Colca2 315652 (Entrez Gene)
Chr8 q23 XP_017459110 (RefSeq)
chimpanzee COLCA2 738122 (Entrez Gene)
Chr11 XP_016777449 (RefSeq)
cattle COLCA2 100294918 (Entrez Gene)
Chr15 XP_024831507 (RefSeq)
dog COLCA2 100686634 (Entrez Gene)
Chr5 XP_013968904 (RefSeq)
chicken COLCA2 101751781 (Entrez Gene)
Chr24 XP_004948106 (RefSeq)
frog, western clawed colca2 101734888 (Entrez Gene)
Chr7 XP_004916170 (RefSeq)
macaque, rhesus COLCA2 710801 (Entrez Gene)
Chr14 XP_028689782 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory