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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
18942

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CAMTA1 HGNC:18806 (HGNC)
23261 (Entrez Gene)
611501 (OMIM)
Chr1 p36.31-p36.23 Chr1:6785324-7769706 (+)
GRCh38
Cerebellar Ataxia, Nonprogressive, with Mental Retardation; CANPMR
Q9Y6Y1 (UniProt | EBI)
NM_015215 (RefSeq)
mouse Camta1 MGI:2140230 (MGI)
100072 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 81.53 cM Chr4:151059525-151861876 (-)
GRCm38
OTTMUSG00000010309 (VEGA)
OTTMUSP00000011013 (VEGA)
OTTMUST00000024009 (VEGA)
rat Camta1 362665 (Entrez Gene)
Chr5 q36 NP_001182488 (RefSeq)
NM_001195559 (RefSeq)
chimpanzee CAMTA1 457905 (Entrez Gene)
Chr1 XP_514346 (RefSeq)
rhesus macaque LOC100424574 100424574 (Entrez Gene)
Chr1 XP_002802205 (RefSeq)
cattle CAMTA1 504811 (Entrez Gene)
Chr16 XP_005194878 (RefSeq)
NM_001100294 (RefSeq)
dog CAMTA1 612806 (Entrez Gene)
Chr5 XP_005620528 (RefSeq)
chicken CAMTA1 419369 (Entrez Gene)
Chr21 XP_417530 (RefSeq)
western clawed frog camta1 100496936 (Entrez Gene)
ChrUN XP_002933905 (RefSeq)
zebrafish camta1a 797322 (Entrez Gene)
Chr23 XP_001919742 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory