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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1887

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human NPAS2 HGNC:7895 (HGNC)
4862 (Entrez Gene)
603347 (OMIM)
NPAS2 (MyGene.info)
HGNC homology
Chr2 q11.2 Chr2:100820151-100996829 (+)
GRCh38.p7
Q99743 (UniProt | EBI)
NM_002518 (RefSeq)
mouse Npas2 MGI:109232 (MGI)
18143 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr1 17.98 cM Chr1:39193731-39363236 (+)
GRCm38
ENSMUSG00000026077 (Ensembl Gene Model)
ENSMUSP00000054719 (Ensembl)
ENSMUST00000056815 (Ensembl)
rat Npas2 316351 (Entrez Gene)
Chr9 q22 NP_001101684 (RefSeq)
NM_001108214 (RefSeq)
chimpanzee NPAS2 459449 (Entrez Gene)
Chr2A XP_016804612 (RefSeq)
cattle NPAS2 614049 (Entrez Gene)
Chr11 NP_001077232 (RefSeq)
NM_001083763 (RefSeq)
dog NPAS2 474552 (Entrez Gene)
Chr10 XP_005626061 (RefSeq)
chicken NPAS2 395433 (Entrez Gene)
Chr1 Q5ZQU2 (UniProt | EBI)
NM_001030542 (RefSeq)
frog, western clawed npas2 101731519 (Entrez Gene)
Chr2 XP_004911838 (RefSeq)
macaque, rhesus NPAS2 710480 (Entrez Gene)
Chr13 XP_028688074 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory