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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1880

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GPNMB HGNC:4462 (HGNC)
10457 (Entrez Gene)
604368 (OMIM)
Chr7 p15 Chr7:23246686-23275110 (+)
GRCh38
Q14956 (UniProt | EBI)
NM_001005340 (RefSeq)
mouse Gpnmb MGI:1934765 (MGI)
93695 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 23.82 cM Chr6:49036518-49058182 (+)
GRCm38
Glaucoma-Related Pigment Dispersion Syndrome; GPDS1
93695 (NCBI Gene Model)
Q99P91 (UniProt | EBI)
NM_053110 (RefSeq)
rat Gpnmb 113955 (Entrez Gene)
Chr4 q24 Q6P7C7 (UniProt | EBI)
NM_133298 (RefSeq)
chimpanzee GPNMB 463289 (Entrez Gene)
Chr7 XP_001156659 (RefSeq)
rhesus macaque GPNMB 704990 (Entrez Gene)
Chr3 NP_001253579 (RefSeq)
NM_001266650 (RefSeq)
cattle GPNMB 509600 (Entrez Gene)
Chr4 NP_001033154 (RefSeq)
NM_001038065 (RefSeq)
dog GPNMB 482355 (Entrez Gene)
Chr14 XP_539472 (RefSeq)
chicken GPNMB 428431 (Entrez Gene)
Chr2 XP_425991 (RefSeq)
zebrafish gpnmb 563348 (Entrez Gene)
Chr19 XP_691804 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory