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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
18780

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CHAMP1 HGNC:20311 (HGNC)
283489 (Entrez Gene)
616327 (OMIM)
C13orf8 (MyGene.info)
HGNC homology
Chr13 q34 Chr13:114314490-114327328 (+)
GRCh38.p7
autosomal dominant non-syndromic intellectual disability 40
Q96JM3 (UniProt | EBI)
NM_032436 (RefSeq)
mouse Champ1 MGI:1196398 (MGI)
101994 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr8 6.4 cM Chr8:13869641-13881639 (+)
GRCm38
101994 (NCBI Gene Model)
Q8K327 (UniProt | EBI)
NM_001363455 (RefSeq)
rat Champ1 306647 (Entrez Gene)
Chr16 q12.5 NP_001100799 (RefSeq)
NM_001107329 (RefSeq)
chimpanzee CHAMP1 467339 (Entrez Gene)
Chr13 XP_009439465 (RefSeq)
cattle CHAMP1 100137827 (Entrez Gene)
Chr12 NP_001192435 (RefSeq)
NM_001205506 (RefSeq)
dog CHAMP1 100688496 (Entrez Gene)
Chr22 XP_013961941 (RefSeq)
chicken CHAMP1 418733 (Entrez Gene)
Chr1 XP_015133399 (RefSeq)
macaque, rhesus CHAMP1 699474 (Entrez Gene)
Chr17 NP_001247729 (RefSeq)
NM_001260800 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory