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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
18728

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human AFAP1L1 HGNC:26714 (HGNC)
134265 (Entrez Gene)
614410 (OMIM)
HGNC homology
Chr5 q32 Chr5:149271838-149343637 (+)
GRCh38.p7
Q8TED9 (UniProt | EBI)
NM_152406 (RefSeq)
mouse Afap1l1 MGI:2147199 (MGI)
106877 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr18 34.71 cM Chr18:61730262-61786662 (-)
GRCm38
106877 (NCBI Gene Model)
Q8BZI0 (UniProt | EBI)
NM_178928 (RefSeq)
rat Afap1l1 291565 (Entrez Gene)
Chr18 q12.1 D4AB98 (UniProt | EBI)
NM_001106142 (RefSeq)
chimpanzee AFAP1L1 462179 (Entrez Gene)
Chr5 XP_009448194 (RefSeq)
cattle AFAP1L1 510738 (Entrez Gene)
Chr7 A6QQV9 (UniProt | EBI)
NM_001100334 (RefSeq)
dog AFAP1L1 489196 (Entrez Gene)
Chr4 XP_022273534 (RefSeq)
chicken AFAP1L1 427621 (Entrez Gene)
Chr13 XP_015149185 (RefSeq)
frog, western clawed afap1l1 100038220 (Entrez Gene)
Chr3 F7EL49 (UniProt | EBI)
macaque, rhesus AFAP1L1 709282 (Entrez Gene)
Chr6 XP_014996705 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
07/07/2020
MGI 6.15
The Jackson Laboratory