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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
18611

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RTN4RL1 HGNC:21329 (HGNC)
146760 (Entrez Gene)
610461 (OMIM)
Chr17 p13.3 Chr17:1934677-2024884 (-)
GRCh38
Q86UN2 (UniProt | EBI)
NM_178568 (RefSeq)
mouse Rtn4rl1 MGI:2661375 (MGI)
237847 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 45.76 cM Chr11:75193783-75267769 (+)
GRCm38
OTTMUSG00000006197 (VEGA)
OTTMUSP00000006489 (VEGA)
OTTMUST00000013970 (VEGA)
rat Rtn4rl1 303311 (Entrez Gene)
Chr10 q24 Q80WD0 (UniProt | EBI)
NM_181377 (RefSeq)
chimpanzee RTN4RL1 468138 (Entrez Gene)
Chr17 XP_523529 (RefSeq)
rhesus macaque LOC720246 720246 (Entrez Gene)
Chr16 XP_001115477 (RefSeq)
cattle RTN4RL1 539358 (Entrez Gene)
Chr19 XP_586643 (RefSeq)
dog RTN4RL1 491197 (Entrez Gene)
Chr9 XP_005624997 (RefSeq)
chicken RTN4RL1 427828 (Entrez Gene)
Chr19 XP_425402 (RefSeq)
western clawed frog rtn4rl1 779975 (Entrez Gene)
ChrUN NP_001072520 (RefSeq)
NM_001079052 (RefSeq)
zebrafish LOC100004523 100004523 (Entrez Gene)
Chr10
rtn4rl1b 403308 (Entrez Gene)
Chr15 NP_982347 (RefSeq)
NM_203480 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory