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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
18484

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CAGE1 HGNC:21622 (HGNC)
285782 (Entrez Gene)
608304 (OMIM)
HGNC homology
Chr6 p24.3 Chr6:7326654-7389709 (-)
GRCh38.p7
Q8TC20 (UniProt | EBI)
NM_001170693 (RefSeq)
mouse Cage1 MGI:1918463 (MGI)
71213 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr13 17.88 cM Chr13:38006052-38037019 (-)
GRCm38
71213 (NCBI Gene Model)
Q5IR70 (UniProt | EBI)
NM_027724 (RefSeq)
rat Cage1 306872 (Entrez Gene)
Chr17 p12 Q66HB6 (UniProt | EBI)
NM_001012052 (RefSeq)
chimpanzee CAGE1 462418 (Entrez Gene)
Chr6 XP_016810359 (RefSeq)
cattle CAGE1 527833 (Entrez Gene)
Chr23 XP_024839847 (RefSeq)
dog CAGE1 609230 (Entrez Gene)
Chr35 XP_013965966 (RefSeq)
macaque, rhesus CAGE1 696307 (Entrez Gene)
Chr4 XP_014991002 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/16/2019
MGI 6.13
The Jackson Laboratory