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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1842

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human IRF4 HGNC:6119 (HGNC)
3662 (Entrez Gene)
601900 (OMIM)
Chr6 p25-p23 Chr6:391739-411443 (+)
GRCh38
Myeloma, Multiple
Q15306 (UniProt | EBI)
NM_002460 (RefSeq)
mouse Irf4 MGI:1096873 (MGI)
16364 (Entrez Gene)
Gene Tree
VISTA-Point
Chr13 13.28 cM Chr13:30749226-30766927 (+)
GRCm38
OTTMUSG00000000722 (VEGA)
OTTMUSP00000000638 (VEGA)
OTTMUST00000001355 (VEGA)
rat Irf4 291100 (Entrez Gene)
Chr17 p12 NP_001099578 (RefSeq)
NM_001106108 (RefSeq)
chimpanzee IRF4 462386 (Entrez Gene)
Chr6 XP_518201 (RefSeq)
cattle IRF4 506141 (Entrez Gene)
Chr23 NP_001193091 (RefSeq)
NM_001206162 (RefSeq)
dog IRF4 100684399 (Entrez Gene)
Chr35 XP_005640209 (RefSeq)
chicken IRF4 374179 (Entrez Gene)
Chr2 NP_989630 (RefSeq)
NM_204299 (RefSeq)
western clawed frog irf4 100490143 (Entrez Gene)
ChrUN XP_002936464 (RefSeq)
zebrafish irf4a 100002070 (Entrez Gene)
Chr2 NP_001116182 (RefSeq)
NM_001122710 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory