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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human MSX2 HGNC:7392 (HGNC)
4488 (Entrez Gene)
123101 (OMIM)
Msh homeobox 2 (MyGene.info)
HGNC homology
Chr5 q35.2 Chr5:174724495-174730899 (+)
parietal foramina
P35548 (UniProt | EBI)
NM_002449 (RefSeq)
mouse Msx2 MGI:97169 (MGI)
17702 (Entrez Gene)
Gene Tree
HGNC homology
Chr13 27.84 cM Chr13:53466884-53473074 (-)
parietal foramina
OTTMUSG00000020950 (VEGA)
OTTMUSP00000022961 (VEGA)
OTTMUST00000049518 (VEGA)
rat Msx2 25483 (Entrez Gene)
Chr17 p14 P52953 (UniProt | EBI)
NM_012982 (RefSeq)
chimpanzee MSX2 744194 (Entrez Gene)
Chr5 A2T764 (UniProt | EBI)
NM_001135625 (RefSeq)
cattle MSX2 540230 (Entrez Gene)
Chr20 Q0P5C3 (UniProt | EBI)
NM_001079614 (RefSeq)
dog MSX2 403663 (Entrez Gene)
Chr4 Q9GK08 (UniProt | EBI)
NM_001003098 (RefSeq)
chicken MSX2 395245 (Entrez Gene)
Chr13 P28362 (UniProt | EBI)
NM_204559 (RefSeq)
zebrafish msx2b 30531 (Entrez Gene)
Chr21 Q01704 (UniProt | EBI)
NM_131276 (RefSeq)
frog, western clawed msx2 394987 (Entrez Gene)
Chr3 XP_002936749 (RefSeq)
macaque, rhesus MSX2 694227 (Entrez Gene)
Chr6 NP_001253421 (RefSeq)
NM_001266492 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory