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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
18279

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LAMA3 HGNC:6483 (HGNC)
3909 (Entrez Gene)
600805 (OMIM)
Chr18 q11.2 Chr18:23689598-23955066 (+)
GRCh38
Epidermolysis Bullosa, Junctional, Herlitz Type
Epidermolysis Bullosa, Junctional, Non-Herlitz Type
Laryngoonychocutaneous Syndrome; LOCS
Q16787 (UniProt | EBI)
NM_000227 (RefSeq)
mouse Lama3 MGI:99909 (MGI)
16774 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 6.2 cM Chr18:12333819-12583013 (+)
GRCm38
Epidermolysis Bullosa, Junctional, Non-Herlitz Type
OTTMUSG00000045059 (VEGA)
OTTMUSP00000066092 (VEGA)
OTTMUST00000118410 (VEGA)
rat Lama3 307582 (Entrez Gene)
Chr18 p13 XP_003753074 (RefSeq)
NM_173306 (RefSeq)
chimpanzee LAMA3 455339 (Entrez Gene)
Chr18 XP_001156417 (RefSeq)
rhesus macaque LAMA3 701313 (Entrez Gene)
Chr18 XP_001095558 (RefSeq)
cattle LAMA3 100336873 (Entrez Gene)
Chr24 XP_003587818 (RefSeq)
dog LAMA3 480173 (Entrez Gene)
Chr7 XP_537297 (RefSeq)
chicken LAMA3 428524 (Entrez Gene)
Chr2 XP_426078 (RefSeq)
western clawed frog lama3 100496680 (Entrez Gene)
ChrUN XP_002934184 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory