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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
18213

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human AP5Z1 HGNC:22197 (HGNC)
9907 (Entrez Gene)
613653 (OMIM)
Chr7 p22.2 Chr7:4775631-4794395 (+)
GRCh38
Spastic Paraplegia 48, Autosomal Recessive; SPG48
O43299 (UniProt | EBI)
NM_014855 (RefSeq)
mouse Ap5z1 MGI:1924908 (MGI)
231855 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 81.53 cM Chr5:142463931-142478715 (+)
GRCm38
231855 (NCBI Gene Model)
Q3U829 (UniProt | EBI)
NM_172725 (RefSeq)
rat Ap5z1 641386 (Entrez Gene)
Chr12 p11 NP_001032297 (RefSeq)
NM_001037220 (RefSeq)
chimpanzee AP5Z1 472273 (Entrez Gene)
Chr7 XP_003318329 (RefSeq)
cattle KIAA0415 512522 (Entrez Gene)
Chr25 NP_001192287 (RefSeq)
NM_001205358 (RefSeq)
dog AP5Z1 609375 (Entrez Gene)
Chr6 XP_851709 (RefSeq)
chicken AP5Z1 416478 (Entrez Gene)
Chr14 XP_003642161 (RefSeq)
western clawed frog LOC100497560 100497560 (Entrez Gene)
ChrUN XP_002942735 (RefSeq)
zebrafish ap5z1 100537934 (Entrez Gene)
Chr3 XP_003198198 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory