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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
18159

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CC2D2A HGNC:29253 (HGNC)
57545 (Entrez Gene)
612013 (OMIM)
Chr4 p15.32 Chr4:15469865-15601971 (+)
GRCh38
COACH Syndrome
Joubert Syndrome 9; JBTS9
Meckel Syndrome, Type 6; MKS6
Q9P2K1 (UniProt | EBI)
NM_001080522 (RefSeq)
mouse Cc2d2a MGI:1924487 (MGI)
231214 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 23.78 cM Chr5:43662379-43740972 (+)
GRCm38
OTTMUSG00000018224 (VEGA)
OTTMUSP00000019776 (VEGA)
OTTMUST00000044029 (VEGA)
rat Cc2d2a 498386 (Entrez Gene)
Chr14 q21 XP_003752786 (RefSeq)
chimpanzee CC2D2A 471148 (Entrez Gene)
Chr4 XP_003310321 (RefSeq)
rhesus macaque CC2D2A 722845 (Entrez Gene)
Chr5 XP_001118936 (RefSeq)
cattle CC2D2A 517240 (Entrez Gene)
Chr6 XP_595408 (RefSeq)
dog CC2D2A 479086 (Entrez Gene)
Chr3 XP_536233 (RefSeq)
chicken CC2D2A 422830 (Entrez Gene)
Chr4 XP_420777 (RefSeq)
western clawed frog cc2d2a 779450 (Entrez Gene)
ChrUN XP_002938689 (RefSeq)
zebrafish cc2d2a 570250 (Entrez Gene)
Chr23 XP_003201209 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory