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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
180

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human JAG1 HGNC:6188 (HGNC)
182 (Entrez Gene)
601920 (OMIM)
Chr20 p12.1-p11.23 Chr20:10637684-10674046 (-)
GRCh38
Alagille Syndrome 1; ALGS1
Jagged 1; JAG1
Tetralogy of Fallot; TOF
P78504 (UniProt | EBI)
NM_000214 (RefSeq)
mouse Jag1 MGI:1095416 (MGI)
16449 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 67.73 cM Chr2:137081456-137116644 (-)
GRCm38
Alagille Syndrome 1; ALGS1
Patent Ductus Arteriosus
OTTMUSG00000015560 (VEGA)
OTTMUSP00000016586 (VEGA)
OTTMUST00000036966 (VEGA)
rat Jag1 29146 (Entrez Gene)
Chr3 q36 Q63722 (UniProt | EBI)
NM_019147 (RefSeq)
chimpanzee JAG1 748073 (Entrez Gene)
Chr20 XP_001169666 (RefSeq)
rhesus macaque JAG1 718580 (Entrez Gene)
Chr10 XP_001116216 (RefSeq)
cattle JAG1 783681 (Entrez Gene)
Chr13 NP_001178107 (RefSeq)
NM_001191178 (RefSeq)
dog JAG1 485769 (Entrez Gene)
Chr24 XP_005634840 (RefSeq)
chicken JAG1 396043 (Entrez Gene)
Chr3 XP_415035 (RefSeq)
western clawed frog jag1 100486874 (Entrez Gene)
ChrUN XP_002931784 (RefSeq)
zebrafish jag1b 140423 (Entrez Gene)
Chr13 Q90Y54 (UniProt | EBI)
NM_131863 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory