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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1789

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human MC1R HGNC:6929 (HGNC)
4157 (Entrez Gene)
155555 (OMIM)
Chr16 q24.3 Chr16:89917879-89920977 (+)
GRCh38
Albinism, Oculocutaneous, Type II; OCA2
Melanoma, Cutaneous Malignant, Susceptibility to, 5; CMM5
Q01726 (UniProt | EBI)
NM_002386 (RefSeq)
mouse Mc1r MGI:99456 (MGI)
17199 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 72.1 cM Chr8:123407082-123410742 (+)
GRCm38
ENSMUSG00000074037 (Ensembl Gene Model)
ENSMUSP00000095929 (Ensembl)
ENSMUST00000098324 (Ensembl)
rat Mc1r 102552838 (Entrez Gene)
Chr19 XP_006222852 (RefSeq)
chimpanzee MC1R 493980 (Entrez Gene)
Chr16 Q9TUK4 (UniProt | EBI)
NM_001009152 (RefSeq)
dog MC1R 489652 (Entrez Gene)
Chr5 O77616 (UniProt | EBI)
NM_001014282 (RefSeq)
chicken MC1R 427562 (Entrez Gene)
Chr11 P55167 (UniProt | EBI)
NM_001031462 (RefSeq)
western clawed frog mc1r 100496792 (Entrez Gene)
ChrUN XP_002937630 (RefSeq)
zebrafish mc1r 353151 (Entrez Gene)
Chr18 NP_851301 (RefSeq)
NM_180970 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory