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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TTC39A HGNC:18657 (HGNC)
22996 (Entrez Gene)
Tetratricopeptide Repeat 39A (MyGene.info)
HGNC homology
Chr1 p32.3 Chr1:51287258-51345116 (-)
Q5SRH9 (UniProt | EBI)
NM_001297663 (RefSeq)
mouse Ttc39a MGI:2444350 (MGI)
230603 (Entrez Gene)
Gene Tree
HGNC homology
Chr4 51.29 cM Chr4:109406623-109444745 (+)
ENSMUSG00000028555 (Ensembl Gene Model)
ENSMUSP00000102229 (Ensembl)
ENSMUST00000106618 (Ensembl)
rat LOC100910316 100910316 (Entrez Gene)
chimpanzee TTC39A 456849 (Entrez Gene)
Chr1 XP_009455924 (RefSeq)
cattle TTC39A 527172 (Entrez Gene)
Chr3 XP_002686408 (RefSeq)
dog TTC39A 100683153 (Entrez Gene)
Chr15 XP_013974727 (RefSeq)
chicken TTC39A 424632 (Entrez Gene)
Chr8 XP_422466 (RefSeq)
zebrafish ttc39a 100320357 (Entrez Gene)
Chr8 XP_002663143 (RefSeq)
frog, western clawed ttc39a 549528 (Entrez Gene)
Chr4 Q28D40 (UniProt | EBI)
NM_001016774 (RefSeq)
macaque, rhesus TTC39A 712187 (Entrez Gene)
Chr1 XP_002801613 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.16
The Jackson Laboratory