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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1762

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SH2D1A HGNC:10820 (HGNC)
4068 (Entrez Gene)
300490 (OMIM)
ChrX q25 ChrX:124346282-124373160 (+)
GRCh38
Lymphoproliferative Syndrome, X-Linked, 1; XLP1
O60880 (UniProt | EBI)
NM_002351 (RefSeq)
mouse Sh2d1a MGI:1328352 (MGI)
20400 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 23.2 cM ChrX:42502453-42529330 (+)
GRCm38
Lymphoproliferative Syndrome, X-Linked, 1; XLP1
OTTMUSG00000017466 (VEGA)
OTTMUSP00000067268 (VEGA)
OTTMUST00000122885 (VEGA)
rat Sh2d1a 501502 (Entrez Gene)
ChrX q11 B2RZ59 (UniProt | EBI)
NM_001109313 (RefSeq)
rhesus macaque SH2D1A 574156 (Entrez Gene)
ChrX Q71S10 (UniProt | EBI)
NM_001032837 (RefSeq)
cattle SH2D1A 613356 (Entrez Gene)
ChrX Q3ZBB1 (UniProt | EBI)
NM_001034733 (RefSeq)
dog SH2D1A 612899 (Entrez Gene)
ChrX XP_852122 (RefSeq)
chicken LOC100857869 100857869 (Entrez Gene)
Chr4 XP_003641167 (RefSeq)
western clawed frog sh2d1a 100487232 (Entrez Gene)
ChrUN XP_002931832 (RefSeq)
zebrafish sh2d1ab 100148259 (Entrez Gene)
Chr14 XP_001920648 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory