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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1753

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LTBR HGNC:6718 (HGNC)
4055 (Entrez Gene)
600979 (OMIM)
Lymphotoxin beta receptor (MyGene.info)
HGNC homology
Chr12 p13.31 Chr12:6375368-6391571 (+)
GRCh38.p7
P36941 (UniProt | EBI)
NM_002342 (RefSeq)
mouse Ltbr MGI:104875 (MGI)
17000 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr6 59.32 cM Chr6:125306571-125313870 (-)
GRCm38
17000 (NCBI Gene Model)
P50284 (UniProt | EBI)
NM_010736 (RefSeq)
rat Ltbr 297604 (Entrez Gene)
Chr4 q42 NP_001008316 (RefSeq)
NM_001008315 (RefSeq)
chimpanzee LTBR 451778 (Entrez Gene)
Chr12 NP_001267326 (RefSeq)
NM_001280397 (RefSeq)
cattle LTBR 504653 (Entrez Gene)
Chr5 NP_001096698 (RefSeq)
NM_001103228 (RefSeq)
dog LTBR 486728 (Entrez Gene)
Chr27 XP_005637313 (RefSeq)
macaque, rhesus LTBR 712550 (Entrez Gene)
Chr11 NP_001252665 (RefSeq)
NM_001265736 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory