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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1741

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LOX HGNC:6664 (HGNC)
4015 (Entrez Gene)
153455 (OMIM)
Chr5 q23.2 Chr5:122063195-122078360 (-)
GRCh38
P28300 (UniProt | EBI)
NM_002317 (RefSeq)
mouse Lox MGI:96817 (MGI)
16948 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 28.22 cM Chr18:52517238-52529708 (-)
GRCm38
Menkes Disease
16948 (NCBI Gene Model)
P28301 (UniProt | EBI)
NM_010728 (RefSeq)
rat Lox 24914 (Entrez Gene)
Chr18 q11 P16636 (UniProt | EBI)
NM_017061 (RefSeq)
chimpanzee LOX 471614 (Entrez Gene)
Chr5 XP_001153015 (RefSeq)
rhesus macaque LOX 699997 (Entrez Gene)
Chr6 XP_001089079 (RefSeq)
cattle LOX 280841 (Entrez Gene)
Chr7 P33072 (UniProt | EBI)
NM_173932 (RefSeq)
dog LOX 481478 (Entrez Gene)
Chr11 XP_538599 (RefSeq)
chicken LOX 396474 (Entrez Gene)
ChrZ Q05063 (UniProt | EBI)
NM_205481 (RefSeq)
western clawed frog lox 780067 (Entrez Gene)
ChrUN NP_001072611 (RefSeq)
NM_001079143 (RefSeq)
zebrafish lox 404621 (Entrez Gene)
Chr10 NP_996972 (RefSeq)
NM_207089 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory