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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
16989

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SMCR8 HGNC:17921 (HGNC)
140775 (Entrez Gene)
617074 (OMIM)
HGNC homology
Chr17 p11.2 Chr17:18315280-18328056 (+)
GRCh38.p7
Q8TEV9 (UniProt | EBI)
NM_144775 (RefSeq)
mouse Smcr8 MGI:2444720 (MGI)
237782 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 37.83 cM Chr11:60777524-60781067 (+)
GRCm38
OTTMUSG00000007770 (VEGA)
OTTMUSP00000008175 (VEGA)
OTTMUST00000017742 (VEGA)
rat Smcr8 497918 (Entrez Gene)
Chr10 q22 NP_001178848 (RefSeq)
NM_001191919 (RefSeq)
chimpanzee SMCR8 743260 (Entrez Gene)
Chr17 XP_001157693 (RefSeq)
cattle SMCR8 781661 (Entrez Gene)
Chr19 XP_015323567 (RefSeq)
dog SMCR8 609316 (Entrez Gene)
Chr5
chicken SMCR8 416519 (Entrez Gene)
Chr14 XP_004945263 (RefSeq)
zebrafish smcr8a 558696 (Entrez Gene)
Chr3 E7FA21 (UniProt | EBI)
NM_001353855 (RefSeq)
frog, western clawed smcr8 100486182 (Entrez Gene)
Chr9 XP_002935890 (RefSeq)
macaque, rhesus SMCR8 701074 (Entrez Gene)
Chr16 XP_001095753 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/14/2017
MGI 6.11
The Jackson Laboratory