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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
16813

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC22A6 HGNC:10970 (HGNC)
9356 (Entrez Gene)
607582 (OMIM)
Chr11 q12.3 Chr11:62976597-62985023 (-)
GRCh38
Q4U2R8 (UniProt | EBI)
NM_004790 (RefSeq)
mouse Slc22a6 MGI:892001 (MGI)
18399 (Entrez Gene)
Gene Tree
VISTA-Point
Chr19 5.44 cM Chr19:8617996-8628299 (+)
GRCm38
18399 (NCBI Gene Model)
Q8VC69 (UniProt | EBI)
NM_008766 (RefSeq)
rat Slc22a6 29509 (Entrez Gene)
Chr1 q43 O35956 (UniProt | EBI)
NM_017224 (RefSeq)
chimpanzee SLC22A6 451273 (Entrez Gene)
Chr11 XP_001160252 (RefSeq)
rhesus macaque SLC22A6 718377 (Entrez Gene)
Chr14 NP_001252596 (RefSeq)
NM_001265667 (RefSeq)
cattle SLC22A6 407180 (Entrez Gene)
Chr29 Q864Z3 (UniProt | EBI)
NM_001001143 (RefSeq)
dog SLC22A6 476050 (Entrez Gene)
Chr18 XP_533258 (RefSeq)
western clawed frog LOC100487511 100487511 (Entrez Gene)
ChrUN XP_002937540 (RefSeq)
LOC100490266 100490266 (Entrez Gene)
ChrUN XP_002937554 (RefSeq)
zebrafish oatx 555218 (Entrez Gene)
Chr21 XP_009293981 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory