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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
16776

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human BRAT1 HGNC:21701 (HGNC)
221927 (Entrez Gene)
614506 (OMIM)
Chr7 p22.3 Chr7:2537810-2555758 (-)
GRCh38
Rigidity and Multifocal Seizure Syndrome, Lethal Neonatal; RMFSL
Q6PJG6 (UniProt | EBI)
NM_152743 (RefSeq)
mouse Brat1 MGI:1891679 (MGI)
231841 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 79.25 cM Chr5:140705011-140719379 (+)
GRCm38
OTTMUSG00000024801 (VEGA)
OTTMUSP00000029892 (VEGA)
OTTMUST00000061083 (VEGA)
rat Brat1 498150 (Entrez Gene)
Chr12 q11 XP_003751181 (RefSeq)
chimpanzee BRAT1 463228 (Entrez Gene)
Chr7 XP_518937 (RefSeq)
rhesus macaque LOC699605 699605 (Entrez Gene)
Chr3 XP_001087105 (RefSeq)
cattle BRAT1 532550 (Entrez Gene)
Chr25 NP_001193384 (RefSeq)
NM_001206455 (RefSeq)
dog BRAT1 609589 (Entrez Gene)
Chr6 XP_851969 (RefSeq)
chicken BRAT1 769893 (Entrez Gene)
Chr14 XP_001233206 (RefSeq)
western clawed frog brat1 100494213 (Entrez Gene)
ChrUN XP_002932270 (RefSeq)
zebrafish brat1 678547 (Entrez Gene)
Chr1 Q1RLU1 (UniProt | EBI)
NM_001040305 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory