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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
16598

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TMPRSS12 HGNC:28779 (HGNC)
283471 (Entrez Gene)
HGNC homology
Chr12 q13.12 Chr12:50842918-50887884 (+)
GRCh38.p7
Q86WS5 (UniProt | EBI)
NM_182559 (RefSeq)
mouse Tmprss12 MGI:1922252 (MGI)
75002 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr15 56.24 cM Chr15:100280837-100293056 (+)
GRCm38
75002 (NCBI Gene Model)
Q3V0Q7 (UniProt | EBI)
NM_183109 (RefSeq)
rat Tmprss12 100362912 (Entrez Gene)
Chr7 XP_008764082 (RefSeq)
chimpanzee TMPRSS12 467200 (Entrez Gene)
Chr12 XP_522598 (RefSeq)
cattle TMPRSS12 100137906 (Entrez Gene)
Chr5 XP_010803335 (RefSeq)
dog TMPRSS12 608553 (Entrez Gene)
Chr27 XP_005636891 (RefSeq)
chicken TMPRSS12 426872 (Entrez Gene)
Chr33 XP_025001210 (RefSeq)
frog, western clawed tmprss12 100127698 (Entrez Gene)
Chr2 NP_001106508 (RefSeq)
NM_001113037 (RefSeq)
macaque, rhesus TMPRSS12 693778 (Entrez Gene)
Chr11 XP_015007204 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
02/18/2020
MGI 6.14
The Jackson Laboratory