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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1642

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human IGHMBP2 HGNC:5542 (HGNC)
3508 (Entrez Gene)
600502 (OMIM)
Chr11 q13.3 Chr11:68903851-68940602 (+)
GRCh38
Spinal Muscular Atrophy, Distal, Autosomal Recessive, 1; DSMA1
P38935 (UniProt | EBI)
NM_002180 (RefSeq)
mouse Ighmbp2 MGI:99954 (MGI)
20589 (Entrez Gene)
Gene Tree
VISTA-Point
Chr19 3.03 cM Chr19:3260924-3283017 (-)
GRCm38
Spinal Muscular Atrophy, Distal, Autosomal Recessive, 1; DSMA1
OTTMUSG00000028273 (VEGA)
OTTMUSP00000035661 (VEGA)
OTTMUST00000070065 (VEGA)
rat Ighmbp2 29532 (Entrez Gene)
Chr1 q42 Q9EQN5 (UniProt | EBI)
NM_031586 (RefSeq)
chimpanzee IGHMBP2 451384 (Entrez Gene)
Chr11 XP_508608 (RefSeq)
rhesus macaque IGHMBP2 721554 (Entrez Gene)
Chr14 XP_001117732 (RefSeq)
cattle IGHMBP2 618606 (Entrez Gene)
Chr29 XP_003584325 (RefSeq)
NM_001082465 (RefSeq)
dog IGHMBP2 483686 (Entrez Gene)
Chr18 XP_540807 (RefSeq)
western clawed frog ighmbp2 100497063 (Entrez Gene)
ChrUN XP_002936547 (RefSeq)
zebrafish ighmbp2 556484 (Entrez Gene)
Chr18 NP_001038365 (RefSeq)
NM_001044900 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory