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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
16354

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human FAM3D HGNC:18665 (HGNC)
131177 (Entrez Gene)
608619 (OMIM)
FAM3D (gene) (MyGene.info)
HGNC homology
Chr3 p14.2 Chr3:58633943-58666843 (-)
GRCh38.p7
Q96BQ1 (UniProt | EBI)
NM_138805 (RefSeq)
mouse Oit1 MGI:1201784 (MGI)
18300 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr14 4.83 cM Chr14:8348937-8378754 (-)
GRCm38
ENSMUSG00000021749 (Ensembl Gene Model)
ENSMUSP00000022269 (Ensembl)
ENSMUST00000022269 (Ensembl)
rat Fam3d 289949 (Entrez Gene)
Chr15 p14 NP_001099497 (RefSeq)
NM_001106027 (RefSeq)
chimpanzee FAM3D 460481 (Entrez Gene)
Chr3 XP_009444007 (RefSeq)
cattle FAM3D 514459 (Entrez Gene)
Chr22 XP_010816084 (RefSeq)
dog FAM3D 100856692 (Entrez Gene)
Chr20 XP_022262218 (RefSeq)
chicken FAM3D 416069 (Entrez Gene)
Chr12 XP_414407 (RefSeq)
frog, western clawed fam3d 493229 (Entrez Gene)
ChrUN NP_001007503 (RefSeq)
NM_001007502 (RefSeq)
LOC100496780 100496780 (Entrez Gene)
ChrUN XP_004914215 (RefSeq)
macaque, rhesus FAM3D 705756 (Entrez Gene)
Chr2 XP_014986014 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
03/19/2019
MGI 6.13
The Jackson Laboratory