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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
16343

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human R3HDM4 HGNC:28270 (HGNC)
91300 (Entrez Gene)
HGNC homology
Chr19 p13.3 Chr19:896503-913225 (-)
GRCh38.p7
Q96D70 (UniProt | EBI)
NM_138774 (RefSeq)
mouse R3hdm4 MGI:1924814 (MGI)
109284 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr10 39.72 cM Chr10:79910052-79917047 (-)
GRCm38
109284 (NCBI Gene Model)
Q4VBF2 (UniProt | EBI)
NM_177994 (RefSeq)
rat R3hdm4 362840 (Entrez Gene)
Chr7 q11 NP_001167445 (RefSeq)
NM_001173974 (RefSeq)
chimpanzee R3HDM4 749903 (Entrez Gene)
Chr19 XP_024207656 (RefSeq)
cattle R3HDM4 614948 (Entrez Gene)
Chr7 Q2KIL7 (UniProt | EBI)
NM_001046548 (RefSeq)
dog R3HDM4 612376 (Entrez Gene)
Chr20 XP_855200 (RefSeq)
chicken R3HDM4 770563 (Entrez Gene)
Chr28 XP_001233902 (RefSeq)
zebrafish r3hdm4 791165 (Entrez Gene)
Chr11 NP_001074116 (RefSeq)
NM_001080647 (RefSeq)
frog, western clawed r3hdm4 779758 (Entrez Gene)
Chr1 NP_001072305 (RefSeq)
NM_001078837 (RefSeq)
macaque, rhesus R3HDM4 704227 (Entrez Gene)
Chr19 NP_001180883 (RefSeq)
NM_001193954 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/09/2019
MGI 6.13
The Jackson Laboratory