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Vertebrate Homology Class
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PKHD1 HGNC:9016 (HGNC)
5314 (Entrez Gene)
606702 (OMIM)
Chr6 p12.2 Chr6:51615347-52087625 (-)
Polycystic Kidney Disease, Autosomal Recessive; ARPKD
P08F94 (UniProt | EBI)
NM_138694 (RefSeq)
mouse Pkhd1 MGI:2155808 (MGI)
241035 (Entrez Gene)
Gene Tree
Chr1 6.27 cM Chr1:20057779-20618064 (-)
Polycystic Kidney Disease, Autosomal Recessive; ARPKD
OTTMUSG00000026248 (VEGA)
OTTMUSP00000032279 (VEGA)
OTTMUST00000064911 (VEGA)
chimpanzee PKHD1 462760 (Entrez Gene)
Chr6 XP_518534 (RefSeq)
rhesus macaque PKHD1 710087 (Entrez Gene)
Chr4 XP_002808437 (RefSeq)
cattle PKHD1 537895 (Entrez Gene)
Chr23 XP_002697357 (RefSeq)
dog PKHD1 474934 (Entrez Gene)
Chr12 XP_005627521 (RefSeq)
chicken PKHD1 422044 (Entrez Gene)
Chr3 XP_420050 (RefSeq)
western clawed frog pkhd1 100496306 (Entrez Gene)
ChrUN XP_002933649 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 5.21
The Jackson Laboratory