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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1626

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HSPD1 HGNC:5261 (HGNC)
3329 (Entrez Gene)
118190 (OMIM)
Chr2 q33.1 Chr2:197486584-197500274 (-)
GRCh38
Leukodystrophy, Hypomyelinating, 4; HLD4
Spastic Paraplegia 13, Autosomal Dominant; SPG13
P10809 (UniProt | EBI)
NM_002156 (RefSeq)
mouse Hspd1 MGI:96242 (MGI)
15510 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 28.01 cM Chr1:55077835-55088243 (-)
GRCm38
Spastic Paraplegia 13, Autosomal Dominant; SPG13
OTTMUSG00000021770 (VEGA)
OTTMUSP00000024365 (VEGA)
OTTMUST00000051674 (VEGA)
rat Hspd1 63868 (Entrez Gene)
Chr9 q22 P63039 (UniProt | EBI)
NM_022229 (RefSeq)
chimpanzee HSPD1 459852 (Entrez Gene)
Chr2B NP_001267080 (RefSeq)
NM_001280151 (RefSeq)
rhesus macaque HSPD1 698024 (Entrez Gene)
Chr12 NP_001182445 (RefSeq)
NM_001195516 (RefSeq)
cattle HSPD1 511913 (Entrez Gene)
Chr2 P31081 (UniProt | EBI)
NM_001166608 (RefSeq)
dog HSPD1 478854 (Entrez Gene)
Chr37 XP_005640553 (RefSeq)
chicken HSPD1 424059 (Entrez Gene)
Chr7 Q5ZL72 (UniProt | EBI)
NM_001012916 (RefSeq)
western clawed frog hspd1 100124945 (Entrez Gene)
ChrUN NP_001096355 (RefSeq)
NM_001102885 (RefSeq)
zebrafish hspd1 282676 (Entrez Gene)
Chr9 NP_851847 (RefSeq)
NM_181330 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/16/2014
MGI 5.19
The Jackson Laboratory