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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1619

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HOXD10 HGNC:5133 (HGNC)
3236 (Entrez Gene)
142984 (OMIM)
Chr2 q31.1 Chr2:176116764-176119942 (+)
GRCh38
Vertical Talus, Congenital; CVT
P28358 (UniProt | EBI)
NM_002148 (RefSeq)
mouse Hoxd10 MGI:96202 (MGI)
15430 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 44.13 cM Chr2:74691924-74695105 (+)
GRCm38
OTTMUSG00000016554 (VEGA)
OTTMUSP00000017845 (VEGA)
OTTMUST00000040007 (VEGA)
rat Hoxd10 303991 (Entrez Gene)
Chr3 q23 NP_001100564 (RefSeq)
NM_001107094 (RefSeq)
chimpanzee HOXD10 739607 (Entrez Gene)
Chr2B A2T7D1 (UniProt | EBI)
NM_001135623 (RefSeq)
cattle HOXD10 540251 (Entrez Gene)
Chr2 NP_001092575 (RefSeq)
NM_001099105 (RefSeq)
dog HOXD11 609973 (Entrez Gene)
Chr36 XP_852429 (RefSeq)
chicken HOXD10 771246 (Entrez Gene)
Chr7 XP_001234539 (RefSeq)
western clawed frog hoxd10 100038085 (Entrez Gene)
ChrUN XP_002935721 (RefSeq)
zebrafish hoxd10a 30404 (Entrez Gene)
Chr9 Q90469 (UniProt | EBI)
NM_131166 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory