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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1615

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HOXB1 HGNC:5111 (HGNC)
3211 (Entrez Gene)
142968 (OMIM)
Chr17 q21.3 Chr17:48529445-48530910 (-)
GRCh38
Facial Paresis, Hereditary Congenital, 3; HCFP3
P14653 (UniProt | EBI)
NM_002144 (RefSeq)
mouse Hoxb1 MGI:96182 (MGI)
15407 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 59.86 cM Chr11:96365752-96368256 (+)
GRCm38
OTTMUSG00000001776 (VEGA)
OTTMUSP00000001715 (VEGA)
OTTMUST00000003560 (VEGA)
rat Hoxb1 303491 (Entrez Gene)
Chr10 q31 XP_001081344 (RefSeq)
chimpanzee HOXB1 749225 (Entrez Gene)
Chr17 A2T6Z0 (UniProt | EBI)
NM_001081572 (RefSeq)
rhesus macaque HOXB1 696111 (Entrez Gene)
Chr16 A2D649 (UniProt | EBI)
NM_001080760 (RefSeq)
cattle HOXB1 528429 (Entrez Gene)
Chr19 NP_001192883 (RefSeq)
NM_001205954 (RefSeq)
dog HOXB1 491052 (Entrez Gene)
Chr9 XP_548172 (RefSeq)
chicken HOXB1 395900 (Entrez Gene)
Chr27 P31259 (UniProt | EBI)
NM_001080859 (RefSeq)
zebrafish hoxb1a 30337 (Entrez Gene)
Chr3 O42366 (UniProt | EBI)
NM_131115 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory