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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
16121

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human KCNT2 HGNC:18866 (HGNC)
343450 (Entrez Gene)
610044 (OMIM)
KCNT2 (MyGene.info)
HGNC homology
Chr1 q31.3 Chr1:196225779-196608905 (-)
GRCh38.p7
Q6UVM3 (UniProt | EBI)
NM_001287820 (RefSeq)
mouse Kcnt2 MGI:3036273 (MGI)
240776 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr1 61.62 cM Chr1:140246158-140612067 (+)
GRCm38
OTTMUSG00000029830 (VEGA)
OTTMUSP00000038560 (VEGA)
OTTMUST00000074239 (VEGA)
rat Kcnt2 304827 (Entrez Gene)
Chr13 q21 Q6UVM4 (UniProt | EBI)
NM_198762 (RefSeq)
chimpanzee KCNT2 457600 (Entrez Gene)
Chr1 XP_001134868 (RefSeq)
cattle KCNT2 781505 (Entrez Gene)
Chr16 XP_015330527 (RefSeq)
dog KCNT2 607500 (Entrez Gene)
Chr38 XP_849284 (RefSeq)
chicken KCNT2 429058 (Entrez Gene)
Chr8 XP_015145870 (RefSeq)
zebrafish LOC565691 565691 (Entrez Gene)
Chr3 XP_009298041 (RefSeq)
frog, western clawed kcnt1 779818 (Entrez Gene)
Chr3 XP_012808571 (RefSeq)
NM_001078897 (RefSeq)
macaque, rhesus KCNT2 711399 (Entrez Gene)
Chr1 XP_014976407 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/14/2017
MGI 6.11
The Jackson Laboratory