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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
15885

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRAF3IP2 HGNC:1343 (HGNC)
10758 (Entrez Gene)
607043 (OMIM)
Chr6 q21 Chr6:111555378-111606274 (-)
GRCh38
Candidiasis, Familial, 8; CANDF8
Psoriasis Susceptibility 13; PSORS13
O43734 (UniProt | EBI)
NM_147686 (RefSeq)
mouse Traf3ip2 MGI:2143599 (MGI)
103213 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 20.86 cM Chr10:39612934-39655307 (+)
GRCm38
Dermatitis, Atopic
Sjogren Syndrome
Systemic Lupus Erythematosus; SLE
OTTMUSG00000031773 (VEGA)
OTTMUSP00000041902 (VEGA)
OTTMUST00000078716 (VEGA)
rat Traf3ip2 361857 (Entrez Gene)
Chr20 q12 NP_001037713 (RefSeq)
NM_001044248 (RefSeq)
chimpanzee TRAF3IP2 741209 (Entrez Gene)
Chr6 XP_001157429 (RefSeq)
rhesus macaque TRAF3IP2 697530 (Entrez Gene)
Chr4 NP_001253065 (RefSeq)
NM_001266136 (RefSeq)
cattle TRAF3IP2 616801 (Entrez Gene)
Chr9 NP_001030560 (RefSeq)
NM_001035483 (RefSeq)
dog TRAF3IP2 475031 (Entrez Gene)
Chr12 XP_532266 (RefSeq)
chicken TRAF3IP2 421752 (Entrez Gene)
Chr3 XP_419782 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory