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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
15850

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human NIPBL HGNC:28862 (HGNC)
25836 (Entrez Gene)
608667 (OMIM)
Chr5 p13.2 Chr5:36876759-37065824 (+)
GRCh38
Cornelia De Lange Syndrome 1; CDLS1
Q6KC79 (UniProt | EBI)
NM_015384 (RefSeq)
mouse Nipbl MGI:1913976 (MGI)
71175 (Entrez Gene)
Gene Tree
VISTA-Point
Chr15 3.82 cM Chr15:8291225-8444463 (-)
GRCm38
Cornelia De Lange Syndrome 1; CDLS1
71175 (NCBI Gene Model)
Q6KCD5 (UniProt | EBI)
NM_201232 (RefSeq)
rat NIPBL 294787 (Entrez Gene)
Chr2 q16 XP_006227293 (RefSeq)
NM_001106415 (RefSeq)
chimpanzee NIPBL 461917 (Entrez Gene)
Chr5 XP_001146090 (RefSeq)
rhesus macaque NIPBL 701209 (Entrez Gene)
Chr6 XP_001096575 (RefSeq)
cattle NIPBL 539566 (Entrez Gene)
Chr20 NP_001193513 (RefSeq)
NM_001206584 (RefSeq)
dog NIPBL 489226 (Entrez Gene)
Chr4 XP_546344 (RefSeq)
chicken LOC427025 427025 (Entrez Gene)
ChrW NP_001244277 (RefSeq)
NM_001257348 (RefSeq)
LOC427439 427439 (Entrez Gene)
ChrZ XP_425012 (RefSeq)
western clawed frog nipbl 100038237 (Entrez Gene)
ChrUN XP_002938229 (RefSeq)
zebrafish nipblb 794108 (Entrez Gene)
Chr10 F1QBY1 (UniProt | EBI)
NM_001161447 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory