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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
156

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HGD HGNC:4892 (HGNC)
3081 (Entrez Gene)
607474 (OMIM)
Chr3 q13.33 Chr3:120628168-120682571 (-)
GRCh38
Alkaptonuria; AKU
Q93099 (UniProt | EBI)
NM_000187 (RefSeq)
mouse Hgd MGI:96078 (MGI)
15233 (Entrez Gene)
Gene Tree
VISTA-Point
Chr16 26.4 cM Chr16:37580153-37632020 (+)
GRCm38
Alkaptonuria; AKU
OTTMUSG00000035117 (VEGA)
OTTMUSP00000048837 (VEGA)
OTTMUST00000089365 (VEGA)
rat Hgd 360719 (Entrez Gene)
Chr11 q21 NP_001012145 (RefSeq)
NM_001012145 (RefSeq)
chimpanzee HGD 460613 (Entrez Gene)
Chr3 XP_001164938 (RefSeq)
rhesus macaque HGD 713499 (Entrez Gene)
Chr2 XP_001110996 (RefSeq)
cattle HGD 507496 (Entrez Gene)
Chr1 NP_001138324 (RefSeq)
NM_001144852 (RefSeq)
dog HGD 478578 (Entrez Gene)
Chr33 XP_535754 (RefSeq)
chicken HGD 418330 (Entrez Gene)
Chr1 XP_416553 (RefSeq)
western clawed frog hgd 101732915 (Entrez Gene)
ChrUN NP_001271223 (RefSeq)
NM_001284294 (RefSeq)
zebrafish hgd 259189 (Entrez Gene)
Chr24 NP_694498 (RefSeq)
NM_152966 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory