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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1554

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GFAP HGNC:4235 (HGNC)
2670 (Entrez Gene)
137780 (OMIM)
HGNC homology
Chr17 q21 Chr17:44905626-44915552 (-)
GRCh38.p2
Alexander Disease; ALXDRD
P14136 (UniProt | EBI)
NM_002055 (RefSeq)
mouse Gfap MGI:95697 (MGI)
14580 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 66.48 cM Chr11:102887336-102900912 (-)
GRCm38
Alexander Disease; ALXDRD
OTTMUSG00000003084 (VEGA)
OTTMUSP00000002989 (VEGA)
OTTMUST00000006346 (VEGA)
rat Gfap 24387 (Entrez Gene)
Chr10 q32.1 P47819 (UniProt | EBI)
NM_017009 (RefSeq)
chimpanzee GFAP 454741 (Entrez Gene)
Chr17 XP_003315449 (RefSeq)
rhesus macaque GFAP 712941 (Entrez Gene)
Chr16 XP_001102095 (RefSeq)
cattle GFAP 281189 (Entrez Gene)
Chr19 Q28115 (UniProt | EBI)
NM_174065 (RefSeq)
dog GFAP 480495 (Entrez Gene)
Chr9 XP_005624433 (RefSeq)
chicken GFAP 419969 (Entrez Gene)
Chr27 XP_418091 (RefSeq)
zebrafish gfap 30646 (Entrez Gene)
Chr3 Q58EE9 (UniProt | EBI)
NM_131373 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory