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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
15202

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human IFT172 HGNC:30391 (HGNC)
26160 (Entrez Gene)
607386 (OMIM)
Chr2 p23.3 Chr2:27444373-27489784 (-)
GRCh38
Short-Rib Thoracic Dysplasia 10 with or without Polydactyly; SRTD10
Q9UG01 (UniProt | EBI)
NM_015662 (RefSeq)
mouse Ift172 MGI:2682064 (MGI)
67661 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 17.27 cM Chr5:31253280-31291114 (-)
GRCm38
Atrioventricular Septal Defect; AVSD
Vacterl Association with Hydrocephalus
ENSMUSG00000038564 (Ensembl Gene Model)
ENSMUSP00000049335 (Ensembl)
ENSMUST00000041565 (Ensembl)
rat Ift172 116475 (Entrez Gene)
Chr6 Q9JKU3 (UniProt | EBI)
NM_053792 (RefSeq)
chimpanzee IFT172 459104 (Entrez Gene)
Chr2A XP_003308981 (RefSeq)
rhesus macaque IFT172 700948 (Entrez Gene)
Chr13 NP_001244518 (RefSeq)
NM_001257589 (RefSeq)
cattle IFT172 100848219 (Entrez Gene)
Chr11 XP_003582850 (RefSeq)
dog IFT172 483013 (Entrez Gene)
Chr17 XP_540128 (RefSeq)
chicken IFT172 421983 (Entrez Gene)
Chr3 XP_419993 (RefSeq)
western clawed frog LOC100490796 100490796 (Entrez Gene)
ChrUN XP_002943869 (RefSeq)
zebrafish ift172 432389 (Entrez Gene)
Chr20 Q5RHH4 (UniProt | EBI)
NM_001002312 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory