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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1511

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human F3 HGNC:3541 (HGNC)
2152 (Entrez Gene)
134390 (OMIM)
Chr1 p22-p21 Chr1:94529176-94541857 (-)
GRCh38
P13726 (UniProt | EBI)
NM_001993 (RefSeq)
mouse F3 MGI:88381 (MGI)
14066 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 52.94 cM Chr3:121723537-121735052 (+)
GRCm38
14066 (NCBI Gene Model)
P20352 (UniProt | EBI)
NM_010171 (RefSeq)
rat F3 25584 (Entrez Gene)
Chr2 q41 P42533 (UniProt | EBI)
NM_013057 (RefSeq)
chimpanzee F3 457038 (Entrez Gene)
Chr1 XP_001156332 (RefSeq)
cattle F3 280686 (Entrez Gene)
Chr3 P30931 (UniProt | EBI)
NM_173878 (RefSeq)
dog F3 490153 (Entrez Gene)
Chr6 NP_001019811 (RefSeq)
NM_001024640 (RefSeq)
chicken F3 429084 (Entrez Gene)
Chr8 XP_426640 (RefSeq)
western clawed frog f3 100489511 (Entrez Gene)
ChrUN XP_002933837 (RefSeq)
zebrafish f3a 567257 (Entrez Gene)
Chr24 NP_001232896 (RefSeq)
NM_001245967 (RefSeq)
f3b 550423 (Entrez Gene)
Chr2 NP_001017728 (RefSeq)
NM_001017728 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory