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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1501

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ERCC1 HGNC:3433 (HGNC)
2067 (Entrez Gene)
126380 (OMIM)
Chr19 q13.32 Chr19:45407333-45478837 (-)
GRCh38
Cerebrooculofacioskeletal Syndrome 4; COFS4
P07992 (UniProt | EBI)
NM_001983 (RefSeq)
mouse Ercc1 MGI:95412 (MGI)
13870 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 9.6 cM Chr7:19344778-19356524 (+)
GRCm38
Xfe Progeroid Syndrome
OTTMUSG00000030622 (VEGA)
OTTMUSP00000039817 (VEGA)
OTTMUST00000075825 (VEGA)
rat Ercc1 292673 (Entrez Gene)
Chr1 q21 NP_001099698 (RefSeq)
NM_001106228 (RefSeq)
chimpanzee ERCC1 450179 (Entrez Gene)
Chr19 NP_001181860 (RefSeq)
NM_001194931 (RefSeq)
cattle ERCC1 615637 (Entrez Gene)
Chr18 Q1LZ75 (UniProt | EBI)
NM_001076385 (RefSeq)
dog ERCC1 612282 (Entrez Gene)
Chr1 XP_005616501 (RefSeq)
western clawed frog ercc1 100135224 (Entrez Gene)
ChrUN NP_001107393 (RefSeq)
NM_001113921 (RefSeq)
zebrafish ercc1 100001425 (Entrez Gene)
Chr9 NP_001096608 (RefSeq)
NM_001103138 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/16/2014
MGI 5.19
The Jackson Laboratory