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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
14695

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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mouse Kdm1b MGI:2145261 (MGI)
218214 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr13 24.5 cM Chr13:47043499-47085279 (+)
GRCm38
ENSMUSG00000038080 (Ensembl Gene Model)
ENSMUSP00000038373 (Ensembl)
ENSMUST00000037025 (Ensembl)
rat Kdm1b 306819 (Entrez Gene)
Chr17 p14 NP_001100813 (RefSeq)
NM_001107343 (RefSeq)
cattle KDM1B 513667 (Entrez Gene)
Chr23 XP_005223877 (RefSeq)
dog KDM1B 478733 (Entrez Gene)
Chr35 XP_535900 (RefSeq)
chicken KDM1B 420829 (Entrez Gene)
Chr2 XP_025003413 (RefSeq)
zebrafish LOC100331367 100331367 (Entrez Gene)
Chr19 XP_017207893 (RefSeq)
frog, western clawed kdm1b 100489838 (Entrez Gene)
Chr6 XP_002932724 (RefSeq)
macaque, rhesus KDM1B 704663 (Entrez Gene)
Chr4 XP_028703647 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/21/2020
MGI 6.14
The Jackson Laboratory