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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1461

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ATN1 HGNC:3033 (HGNC)
1822 (Entrez Gene)
607462 (OMIM)
Chr12 p13.31 Chr12:6924463-6942321 (+)
GRCh38
Dentatorubral-Pallidoluysian Atrophy; DRPLA
P54259 (UniProt | EBI)
NM_001007026 (RefSeq)
mouse Atn1 MGI:104725 (MGI)
13498 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 59.17 cM Chr6:124739189-124756524 (-)
GRCm38
OTTMUSG00000023122 (VEGA)
OTTMUSP00000026803 (VEGA)
OTTMUST00000055873 (VEGA)
rat Atn1 29515 (Entrez Gene)
Chr4 q42 P54258 (UniProt | EBI)
NM_017228 (RefSeq)
LOC100911672 100911672 (Entrez Gene)
Chr9 XP_003750706 (RefSeq)
chimpanzee ATN1 451803 (Entrez Gene)
Chr12 Q5IS70 (UniProt | EBI)
NM_001034165 (RefSeq)
rhesus macaque ATN1 722114 (Entrez Gene)
Chr11 XP_001118307 (RefSeq)
cattle ATN1 513125 (Entrez Gene)
Chr5 NP_001192677 (RefSeq)
NM_001205748 (RefSeq)
dog ATN1 611607 (Entrez Gene)
Chr27 XP_003640006 (RefSeq)
chicken ATN1 427946 (Entrez Gene)
Chr1 XP_425518 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory