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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
14274

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SCGB3A2 HGNC:18391 (HGNC)
117156 (Entrez Gene)
606531 (OMIM)
Chr5 q32 Chr5:147878711-147882193 (+)
GRCh38
Asthma, Susceptibility to
Q96PL1 (UniProt | EBI)
NM_054023 (RefSeq)
mouse Scgb3a2 MGI:2153470 (MGI)
117158 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 23.49 cM Chr18:43764327-43767393 (+)
GRCm38
ENSMUSG00000038791 (Ensembl Gene Model)
ENSMUSP00000038872 (Ensembl)
ENSMUST00000043803 (Ensembl)
rat Scgb3a2 498854 (Entrez Gene)
Chr18 p11 NP_001019454 (RefSeq)
NM_001024283 (RefSeq)
chimpanzee SCGB3A2 471688 (Entrez Gene)
Chr5 XP_001160330 (RefSeq)
rhesus macaque SCGB3A2 709138 (Entrez Gene)
Chr6 XP_001102976 (RefSeq)
dog SCGB3A2 100686652 (Entrez Gene)
Chr2 XP_003433811 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory