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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
14207

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CATSPER1 HGNC:17116 (HGNC)
117144 (Entrez Gene)
606389 (OMIM)
Chr11 q12.1 Chr11:66016752-66026517 (-)
GRCh38
Spermatogenic Failure 7; SPGF7
Q8NEC5 (UniProt | EBI)
NM_053054 (RefSeq)
mouse Catsper1 MGI:2179947 (MGI)
225865 (Entrez Gene)
Gene Tree
VISTA-Point
Chr19 4.3 cM Chr19:5335741-5344153 (+)
GRCm38
ENSMUSG00000038498 (Ensembl Gene Model)
ENSMUSP00000045430 (Ensembl)
ENSMUST00000043380 (Ensembl)
rat Catsper1 689349 (Entrez Gene)
Chr1 q43 XP_002725816 (RefSeq)
chimpanzee CATSPER1 451341 (Entrez Gene)
Chr11 XP_003313190 (RefSeq)
rhesus macaque CATSPER1 721869 (Entrez Gene)
Chr14 XP_001118063 (RefSeq)
cattle CATSPER1 523556 (Entrez Gene)
Chr29 XP_601857 (RefSeq)
dog CATSPER1 476016 (Entrez Gene)
Chr18 XP_005631803 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory