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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CATSPER1 HGNC:17116 (HGNC)
117144 (Entrez Gene)
606389 (OMIM)
CatSper1 (MyGene.info)
HGNC homology
Chr11 q13.1 Chr11:66016752-66026518 (-)
spermatogenic failure 7
Q8NEC5 (UniProt | EBI)
NM_053054 (RefSeq)
mouse Catsper1 MGI:2179947 (MGI)
225865 (Entrez Gene)
Gene Tree
HGNC homology
Chr19 4.3 cM Chr19:5335741-5344280 (+)
ENSMUSG00000038498 (Ensembl Gene Model)
ENSMUSP00000045430 (Ensembl)
ENSMUST00000043380 (Ensembl)
rat Catsper1 689349 (Entrez Gene)
Chr1 q43 XP_002725816 (RefSeq)
chimpanzee CATSPER1 451341 (Entrez Gene)
Chr11 XP_016776772 (RefSeq)
cattle CATSPER1 523556 (Entrez Gene)
Chr29 XP_024843337 (RefSeq)
dog CATSPER1 476016 (Entrez Gene)
Chr18 XP_013976676 (RefSeq)
macaque, rhesus CATSPER1 721869 (Entrez Gene)
Chr14 XP_014969145 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.14
The Jackson Laboratory