About   Help   FAQ
HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
select all deselect all Go
human HAPLN1 HGNC:2380 (HGNC)
1404 (Entrez Gene)
115435 (OMIM)
HAPLN1 (MyGene.info)
HGNC homology
Chr5 q14.3 Chr5:83638198-83721210 (-)
P10915 (UniProt | EBI)
NM_001884 (RefSeq)
mouse Hapln1 MGI:1337006 (MGI)
12950 (Entrez Gene)
Gene Tree
HGNC homology
Chr13 45.5 cM Chr13:89540528-89611832 (+)
spondyloepiphyseal dysplasia congenita
12950 (NCBI Gene Model)
Q9QUP5 (UniProt | EBI)
NM_013500 (RefSeq)
rat Hapln1 29331 (Entrez Gene)
Chr2 q12 P03994 (UniProt | EBI)
NM_019189 (RefSeq)
chimpanzee HAPLN1 461765 (Entrez Gene)
Chr5 XP_001147083 (RefSeq)
cattle HAPLN1 281717 (Entrez Gene)
Chr7 P55252 (UniProt | EBI)
NM_174288 (RefSeq)
dog HAPLN1 488921 (Entrez Gene)
Chr3 XP_013967711 (RefSeq)
chicken HAPLN1 396475 (Entrez Gene)
ChrZ P07354 (UniProt | EBI)
NM_205482 (RefSeq)
zebrafish hapln1b 569074 (Entrez Gene)
Chr10 XP_009303960 (RefSeq)
frog, western clawed hapln1 100490017 (Entrez Gene)
Chr1 XP_002933976 (RefSeq)
macaque, rhesus HAPLN1 712501 (Entrez Gene)
Chr6 XP_014995846 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
MGI 6.14
The Jackson Laboratory