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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
14197

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human APOA5 HGNC:17288 (HGNC)
116519 (Entrez Gene)
606368 (OMIM)
Chr11 q23 Chr11:116789367-116792420 (-)
GRCh38
Hyperlipoproteinemia, Type V
Hypertriglyceridemia, Familial
Q6Q788 (UniProt | EBI)
NM_052968 (RefSeq)
mouse Apoa5 MGI:1913363 (MGI)
66113 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 25.37 cM Chr9:46268633-46271919 (+)
GRCm38
OTTMUSG00000028704 (VEGA)
OTTMUSP00000036352 (VEGA)
OTTMUST00000071088 (VEGA)
rat Apoa5 140638 (Entrez Gene)
Chr8 q23 Q9QUH3 (UniProt | EBI)
NM_080576 (RefSeq)
chimpanzee APOA5 466791 (Entrez Gene)
Chr11 XP_003313360 (RefSeq)
rhesus macaque APOA5 696484 (Entrez Gene)
Chr14 XP_001090079 (RefSeq)
cattle APOA5 538914 (Entrez Gene)
Chr15 NP_001076961 (RefSeq)
NM_001083492 (RefSeq)
dog APOA5 489393 (Entrez Gene)
Chr5 XP_546511 (RefSeq)
chicken APOA5 419802 (Entrez Gene)
Chr24 XP_417939 (RefSeq)
western clawed frog apoa5 100144664 (Entrez Gene)
ChrUN NP_001116904 (RefSeq)
NM_001123432 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory