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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
14164

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SNX18 HGNC:19245 (HGNC)
112574 (Entrez Gene)
SNAG1 (MyGene.info)
HGNC homology
Chr5 q11.2 Chr5:54517759-54619249 (+)
GRCh38.p7
Q96RF0 (UniProt | EBI)
NM_001145427 (RefSeq)
mouse Snx18 MGI:2137642 (MGI)
170625 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr13 64.0 cM Chr13:113592179-113618564 (-)
GRCm38
170625 (NCBI Gene Model)
Q91ZR2 (UniProt | EBI)
NM_130796 (RefSeq)
rat Snx18 310097 (Entrez Gene)
Chr2 q14 NP_001101122 (RefSeq)
NM_001107652 (RefSeq)
chimpanzee SNX18 471817 (Entrez Gene)
Chr5 XP_016808803 (RefSeq)
cattle SNX18 538366 (Entrez Gene)
Chr20 NP_001077200 (RefSeq)
NM_001083731 (RefSeq)
dog SNX18 610530 (Entrez Gene)
Chr4 XP_005619383 (RefSeq)
chicken SNX18 768969 (Entrez Gene)
ChrZ
zebrafish snx18a 562372 (Entrez Gene)
Chr5 NP_001093476 (RefSeq)
NM_001100006 (RefSeq)
frog, western clawed snx18 496591 (Entrez Gene)
Chr1 NP_001011173 (RefSeq)
NM_001011173 (RefSeq)
macaque, rhesus SNX18 704669 (Entrez Gene)
Chr6 NP_001248679 (RefSeq)
NM_001261750 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory