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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1413

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CPT1A HGNC:2328 (HGNC)
1374 (Entrez Gene)
600528 (OMIM)
Chr11 q13.2 Chr11:68754620-68841931 (-)
GRCh38
Carnitine Palmitoyltransferase I Deficiency
P50416 (UniProt | EBI)
NM_001031847 (RefSeq)
mouse Cpt1a MGI:1098296 (MGI)
12894 (Entrez Gene)
Gene Tree
VISTA-Point
Chr19 3.08 cM Chr19:3323301-3385732 (+)
GRCm38
Carnitine Palmitoyltransferase I Deficiency
ENSMUSG00000024900 (Ensembl Gene Model)
ENSMUSP00000025835 (Ensembl)
ENSMUST00000025835 (Ensembl)
rat Cpt1a 25757 (Entrez Gene)
Chr1 q43 P32198 (UniProt | EBI)
NM_031559 (RefSeq)
chimpanzee CPT1A 451382 (Entrez Gene)
Chr11 XP_001173853 (RefSeq)
rhesus macaque CPT1A 709837 (Entrez Gene)
Chr14 XP_001101846 (RefSeq)
cattle CPT1A 506812 (Entrez Gene)
Chr29 XP_001789570 (RefSeq)
dog CPT1A 403583 (Entrez Gene)
Chr18 NP_001273789 (RefSeq)
NM_001286860 (RefSeq)
chicken CPT1A 423118 (Entrez Gene)
Chr5 NP_001012916 (RefSeq)
NM_001012898 (RefSeq)
western clawed frog LOC100490391 100490391 (Entrez Gene)
ChrUN XP_002943016 (RefSeq)
zebrafish cpt1a 558088 (Entrez Gene)
Chr7 NP_001038319 (RefSeq)
NM_001044854 (RefSeq)
si:ch211-236l14.3 560000 (Entrez Gene)
Chr25 XP_002666893 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory