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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CPT1A HGNC:2328 (HGNC)
1374 (Entrez Gene)
600528 (OMIM)
HGNC homology
Chr11 q13.3 Chr11:68754620-68844410 (-)
carnitine palmitoyltransferase I deficiency
P50416 (UniProt | EBI)
NM_001876 (RefSeq)
mouse Cpt1a MGI:1098296 (MGI)
12894 (Entrez Gene)
Gene Tree
HGNC homology
Chr19 3.08 cM Chr19:3323301-3385732 (+)
carnitine palmitoyltransferase I deficiency
ENSMUSG00000024900 (Ensembl Gene Model)
ENSMUSP00000025835 (Ensembl)
ENSMUST00000025835 (Ensembl)
rat Cpt1a 25757 (Entrez Gene)
Chr1 q42 P32198 (UniProt | EBI)
NM_031559 (RefSeq)
chimpanzee CPT1A 451382 (Entrez Gene)
Chr11 XP_016776910 (RefSeq)
cattle CPT1A 506812 (Entrez Gene)
Chr29 NP_001291918 (RefSeq)
NM_001304989 (RefSeq)
dog CPT1A 403583 (Entrez Gene)
Chr18 NP_001273789 (RefSeq)
NM_001286860 (RefSeq)
chicken CPT1A 423118 (Entrez Gene)
Chr5 NP_001012916 (RefSeq)
NM_001012898 (RefSeq)
zebrafish cpt1aa 558088 (Entrez Gene)
Chr7 NP_001038319 (RefSeq)
NM_001044854 (RefSeq)
cpt1ab 560000 (Entrez Gene)
Chr25 XP_021326369 (RefSeq)
frog, western clawed LOC100490391 100490391 (Entrez Gene)
Chr4 XP_002943016 (RefSeq)
macaque, rhesus CPT1A 709837 (Entrez Gene)
Chr14 XP_014968959 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.11
The Jackson Laboratory